Collection and analysis of whole genome sequencing data from food-borne pathogens and other relevant microorganisms isolated from human, animal, food, feed and food/feed environmental samples in the joint ECDC–EFSA molecular typing database
This report identifies and compares potential platforms/solutions for the set-up and running of a joint ECDC–EFSA database to collect and analyse whole genome sequencing (WGS) data for Listeria monocytogenes, Salmonella and Escherichia coli. In particular, WGS introduces the need for specific components for storage and analysis of these data.
Third external quality assessment on species identification and antimicrobial susceptibility testing of Campylobacter, 2017
This report presents the results of the third round of the EQA on AST for national public health laboratories for Campylobacter (Campylobacter EQA3-AST) within the Food- and Waterborne Diseases and Zoonoses Network (FWD-Net).
Risk assessment: Who is at risk of measles in the EU/EEA?
A large epidemic of measles has affected the EU/EEA Member States in the past three years, with 44 074 cases reported to ECDC by 30 Member States between 1 January 2016 and 31 March 2019.
Communicable disease threats report, 12-18 May 2019, week 20
This issue of the ECDC Communicable Disease Threats Report (CDTR) covers the period from 12-18 May 2019 and includes updates on poliomyelitis, chikungunya virus disease and dengue, measles, monkeypox, dengue, Ebola virus disease, influenza, Rift Valley fever, Crimean-Congo haemmorhagic fever and Legionnaires' disease.
- Chikungunya virus disease
- Crimean-Congo haemorrhagic fever
- Democratic Republic of the Congo
- Ebola haemorrhagic fever
- Ebola outbreak - North Kivu, Ituri, DRC
- Influenza in humans, seasonal
- La Réunion
- Legionnaires’ disease
- Public health threat
- Rift Valley fever
Proficiency test for Listeria monocytogenes whole genome assembly 2018
This report presents the results of a proficiency test to evaluate the inter-laboratory reproducibility and portability of Listeria monocytogenes (Lm) genome assemblies in the EU/EEA.
Invasive pneumococcal disease - Annual Epidemiological Report for 2017
In 2017, 23 886 confirmed cases of invasive pneumococcal disease (IPD) were reported in the EU/EEA.
Poliomyelitis - Annual Epidemiological Report for 2017
The WHO European Region was declared polio-free in 2002. Neither wild-type nor vaccine-type viruses were notified in the WHO European Region in 2017, but the risk of importation and subsequent transmission remains high in certain countries.
Monthly measles and rubella monitoring report, May 2019
This monitoring report is based on measles and rubella data from The European Surveillance System (TESSy) for the period 1 April 2018 to 31 March 2019.